Index

A

AnonymousTarget (class in gwf) apply() (gwf.filtering.ApplyMixin method)

ApplyMixin (class in gwf.filtering) Apptainer (class in gwf.executors)

B

BackendStatus (class in gwf.backends)

Bash (class in gwf.executors)

C

CANCELLED (gwf.backends.BackendStatus attribute) (gwf.core.Status attribute) COMPLETED (gwf.backends.BackendStatus attribute) (gwf.core.Status attribute)

Conda (class in gwf.executors) create_backend() (in module gwf.backends)

D

dfs() (gwf.core.Graph method)

discover_backends() (in module gwf.backends)

E

endpoints() (gwf.core.Graph method)

F

FAILED (gwf.backends.BackendStatus attribute) (gwf.core.Status attribute) filter_generic() (in module gwf.filtering)

filter_names() (in module gwf.filtering) from_context() (gwf.Workflow class method) from_path() (gwf.Workflow class method) from_targets() (gwf.core.Graph class method)

G

get_status_map() (in module gwf.scheduling) glob() (gwf.Workflow method) Graph (class in gwf.core) guess_backend() (in module gwf.backends) gwf module gwf.backends module gwf.backends.local module gwf.backends.lsf module gwf.backends.pbs module

gwf.backends.sge module gwf.backends.slurm module gwf.core module gwf.executors module gwf.filtering module gwf.scheduling module

I

iglob() (gwf.Workflow method) inputs (gwf.TargetList property)

is_final() (gwf.backends.BackendStatus method) IsolationConfig (class in gwf)

L

list_backends() (in module gwf.backends)

M

map() (gwf.Workflow method) module gwf gwf.backends gwf.backends.local gwf.backends.lsf gwf.backends.pbs gwf.backends.sge gwf.backends.slurm gwf.core gwf.executors gwf.filtering gwf.scheduling

O

outputs (gwf.TargetList property)

P

Pixi (class in gwf.executors)

predicate() (gwf.filtering.ApplyMixin method)

R

render_exec_script() (in module gwf.executors)

RUNNING (gwf.backends.BackendStatus attribute) (gwf.core.Status attribute)

S

schedule() (in module gwf.scheduling) shell() (gwf.Workflow method) SHOULDRUN (gwf.core.Status attribute) Singularity (class in gwf.executors) SKIPPED (gwf.core.Status attribute)

Status (class in gwf.core) submit_backend() (in module gwf.scheduling) submit_workflow() (in module gwf.scheduling) SUBMITTED (gwf.backends.BackendStatus attribute) (gwf.core.Status attribute)

T

Target (class in gwf) target() (gwf.Workflow method)

target_from_template() (gwf.Workflow method) TargetList (class in gwf)

U

UNKNOWN (gwf.backends.BackendStatus attribute)

W

Workflow (class in gwf)